Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_2721041_2722339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2721041 - 2722339

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTTCTTATTT

Flanking Amino Acid:

LESLGEPIRQGHFIVWEGAP

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.4

0.82

0.8

86.6

26.1

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

69.5

0.69

1.5

82.89

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042171

2719414 - 2744161

24748