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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2725689_2726389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2725689 - 2726389

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTCCCTTCATC

Flanking Amino Acid:

APKPSVSWYKDGKPVEVDPH

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

72.4

0.5

75.5

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

68.9

0.58

1.7

79.77

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042171

2719414 - 2744161

24748