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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27257251_27259500_F

Intron Information:

Intron Rank:

134190

Intron Class:

major

Intron Phase:

Intron Coordinates:

27257251 - 27259500

Intron Length:

2250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAATTC

5'SS Class:

major

3'SS Sequence:

TTTTATATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CATTTGCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

74.4

29.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

88.1

0.86

0.8

32.8

Minor 5ss

36.4

-1.5

3.3

49.9

46.6

Minor BPS

47.8

-0.1

2.3

64.57

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025352

27257056 - 27264353

7298