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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2726942_2727518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2726942 - 2727518

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCACATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TTTTCCACATAC

Flanking Amino Acid:

TIEGAPRPQIRWYKDGVLLK

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

33.4

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

76.6

0.6

0.9

70.3

34.4

Minor 5ss

38.3

-1.3

2.8

51.3

45.1

Minor BPS

47.8

-0.1

2.1

69.43

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042171

2719414 - 2744161

24748