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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2739467_2739691_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2739467 - 2739691

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGGGTCTG

5'SS Class:

weak_major

3'SS Sequence:

GAGGATGAATTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAGAA

U12 Branch Point Sequence:

GGAGGATGAATT

Flanking Amino Acid:

QGSSEDRSSPYTSWPVEEGI

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

52.6

45.9

Major BPS

50.4

0.01

1.1

47.3

36.1

Major PPT

46.5

-0.2

1.1

37.5

Minor 5ss

-1.9

3.3

45.3

Minor BPS

40.4

-0.6

52.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042171

2719414 - 2744161

24748