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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27601710_27602227_R

Intron Information:

Intron Rank:

155078

Intron Class:

major

Intron Phase:

Intron Coordinates:

27601710 - 27602227

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

CCAATGTCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

34.2

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

84.1

0.77

0.6

84.1

23.8

Minor 5ss

34.2

-1.8

2.8

41.4

44.9

Minor BPS

-0.6

2.1

47.33

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029353

27600430 - 27602413

1984