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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27690068_27690565_R

Intron Information:

Intron Rank:

137647

Intron Class:

major

Intron Phase:

Intron Coordinates:

27690068 - 27690565

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGAGGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.3

56.9

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

32.3

-2

3.2

42.3

44.6

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032189

27688708 - 27690904

2197