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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27732570_27734975_F

Intron Information:

Intron Rank:

147000

Intron Class:

major

Intron Phase:

Intron Coordinates:

27732570 - 27734975

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAGTTCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

83.4

0.75

0.8

77.4

35.5

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

73.8

0.83

1.1

79.05

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022478

27732259 - 27735147

2889