Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_2774098_2780177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2774098 - 2780177

Intron Length:

6080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTGC

5'SS Class:

major

3'SS Sequence:

TCCCCTATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TTTCCCCTATGA

Flanking Amino Acid:

QTSETSPSCSRKLFLSR*

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

43.1

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

68.7

0.42

64.4

35.3

Minor 5ss

43.1

-0.8

3.1

59.3

45.4

Minor BPS

48.5

-0.1

2.2

69.71

42.3

Associated Gene:

Gene:

ACKR2

Ensembl Gene ID:

ENSAPLG00000000705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000679

2774076 - 2781462

7387