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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27911827_27913855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27911827 - 27913855

Intron Length:

2029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTCCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATCAAGA

Flanking Amino Acid:

NKLAPSDQYKFYSVNVDYSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.4

0.59

0.7

72.7

25.4

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

45.2

-0.3

2.2

61.87

43.9

Associated Gene:

Gene:

NDUFA4

Ensembl Gene ID:

ENSAPLG00000016250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016951

27911770 - 27915011

3242