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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27941261_27941505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

27941261 - 27941505

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTTCCCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

61.2

43.9

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

86.1

0.81

0.6

81.7

23.1

Minor 5ss

34.3

-1.8

3.2

45.8

43.4

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

PHF14

Ensembl Gene ID:

ENSAPLG00000016105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024740

27941260 - 28104684

163425

ENSAPLT00000020410

27941260 - 28070765

129506

ENSAPLT00000019007

27941260 - 28104684

163425

ENSAPLT00000016848

27941260 - 28049022

107763

ENSAPLT00000036715

27941260 - 28104684

163425