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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2796838_2801114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2796838 - 2801114

Intron Length:

4277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TTGTCGTTACGA

Flanking Amino Acid:

EQPVTEDDSKRLLEVENEQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

66.8

0.42

1.1

37.7

Major PPT

79.2

0.66

0.8

70.9

35.4

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

47.2

-0.2

2.5

66.48

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035103

2796463 - 2827744

31282

ENSAPLT00000025434

2796463 - 2828297

31835