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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2801264_2803515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2801264 - 2803515

Intron Length:

2252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCGCA

5'SS Class:

major

3'SS Sequence:

GTCTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTGCTTTTATG

Flanking Amino Acid:

KMQEDRLALSGMSGLAGDVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

40.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.3

0.68

0.9

76.7

37.5

Minor 5ss

42.2

-0.9

3.2

56.9

47.3

Minor BPS

57.6

0.09

1.8

66.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035103

2796463 - 2827744

31282

ENSAPLT00000025434

2796463 - 2828297

31835

ENSAPLT00000013886

2800224 - 2825482

25259

ENSAPLT00000038150

2798998 - 2825482

26485