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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28048001_28069053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28048001 - 28069053

Intron Length:

21053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

AGGGGTCTATTT

Flanking Amino Acid:

FVRNVTLHLPKTPSRQMRWS

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

72.8

0.51

0.9

69.6

36.8

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

36.4

-0.9

46.85

Associated Gene:

Gene:

PHF14

Ensembl Gene ID:

ENSAPLG00000016105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036715

27941260 - 28104684

163425

ENSAPLT00000020410

27941260 - 28070765

129506