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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2820711_2824669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2820711 - 2824669

Intron Length:

3959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

ATGAAATCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTACTAAAGC

Flanking Amino Acid:

TQKPPLRGKTGQASHSRLTL

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

64.6

0.33

55.2

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

56.3

0.18

2.1

75.23

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035103

2796463 - 2827744

31282

ENSAPLT00000025434

2796463 - 2828297

31835

ENSAPLT00000013886

2800224 - 2825482

25259

ENSAPLT00000038150

2798998 - 2825482

26485