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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28222080_28234156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28222080 - 28234156

Intron Length:

12077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAACA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AACTGCTGAATT

Flanking Amino Acid:

ETCGPGLQARAITCRRQDGG

Intron Amino Acid Position:

887

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

1.1

75.5

33.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

30.1

-2.3

2.6

33.6

41.1

Minor BPS

51.9

0.14

1.9

68.36

42.6

Associated Gene:

Gene:

THSD7A

Ensembl Gene ID:

ENSAPLG00000005027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005201

28206764 - 28416986

210223