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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2838812_2839167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2838812 - 2839167

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

ATCTGTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTGTTTTAACA

Flanking Amino Acid:

CITMLYVFAETHFDRGINDW

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.9

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.6

0.53

0.9

70.8

39.2

Minor 5ss

32.9

-1.9

2.6

37.5

32.2

Minor BPS

69.8

0.62

1.3

75.16

36.6

Associated Gene:

Gene:

HHATL

Ensembl Gene ID:

ENSAPLG00000013163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013722

2832515 - 2842752

10238