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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2840146_2841363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2840146 - 2841363

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TTTCCCCTCACT

Flanking Amino Acid:

FQWEPFAKLEAKMSAAMSRR

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

68.6

0.42

0.9

61.1

35.1

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

61.1

0.43

2.1

86.59

38.8

Associated Gene:

Gene:

HHATL

Ensembl Gene ID:

ENSAPLG00000013163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013722

2832515 - 2842752

10238