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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2841506_2842630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2841506 - 2842630

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCGCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

ACCGAGGTGACC

Flanking Amino Acid:

QLVTKRLLLTGFPVSTLSIW

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

0.56

0.8

36.4

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

33.9

-1.2

2.5

39.87

40.2

Associated Gene:

Gene:

HHATL

Ensembl Gene ID:

ENSAPLG00000013163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013722

2832515 - 2842752

10238