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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28506705_28508821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28506705 - 28508821

Intron Length:

2117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

TCQGTGRIPRGQENQLVALI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

82.1

34.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

TMEM106B

Ensembl Gene ID:

ENSAPLG00000005362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033724

28506483 - 28552056

45574

ENSAPLT00000017241

28506483 - 28517387

10905

ENSAPLT00000005563

28506483 - 28517072

10590