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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28568763_28569481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28568763 - 28569481

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTCTTTTAATT

Flanking Amino Acid:

TGLLCGKRIQHI*

Intron Amino Acid Position:

1754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.79

0.8

82.3

32.9

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

70.3

0.72

1.2

80.3

36.2

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006014

28568562 - 28610166

41605