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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28569586_28570100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28569586 - 28570100

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGGTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTACTA

Flanking Amino Acid:

PQWEGIQCQTPVCSQKCLFG

Intron Amino Acid Position:

1719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

84.1

30.2

Major BPS

100

1.24

0.5

100

Major PPT

72.3

0.5

68.1

37.6

Minor 5ss

45.2

-0.5

2.8

57.4

40.7

Minor BPS

65.3

0.48

1.9

80.44

35.6

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006014

28568562 - 28610166

41605

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344

ENSAPLT00000037502

28567823 - 28610166

42344