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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28570197_28571477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28570197 - 28571477

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GATGTTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TATAACCAAACT

Flanking Amino Acid:

SGWGGKRCNTPICLQECKNG

Intron Amino Acid Position:

1687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.2

90.9

28.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

71.5

0.48

1.1

65.5

45.1

Minor 5ss

-0.8

2.9

59.7

Minor BPS

47.2

-0.1

2.2

72.21

43.7

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006014

28568562 - 28610166

41605

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344

ENSAPLT00000037502

28567823 - 28610166

42344