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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28572282_28572629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28572282 - 28572629

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

CCTGTTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCCTCCTCACCC

Flanking Amino Acid:

PGWYGPTCSTAMCDPVCLNG

Intron Amino Acid Position:

1591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.8

0.6

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

55.5

0.15

1.9

66.26

45.6

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037502

28567823 - 28610166

42344

ENSAPLT00000006014

28568562 - 28610166

41605

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344