Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_28576418_28576768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28576418 - 28576768

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGCAA

5'SS Class:

major

3'SS Sequence:

AATTACCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTCTCTTAATT

Flanking Amino Acid:

GYYGDGFTCRAICRQTCGKN

Intron Amino Acid Position:

1463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.3

39.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.58

0.9

71.1

39.6

Minor 5ss

36.2

-1.6

3.2

47.1

48.3

Minor BPS

76.7

0.92

1.1

85.97

33.6

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000037502

28567823 - 28610166

42344

ENSAPLT00000006014

28568562 - 28610166

41605