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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28577450_28579071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28577450 - 28579071

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

TAATATCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTCCTTTATT

Flanking Amino Acid:

ERKDSTGEVEGFQQSSFDKV

Intron Amino Acid Position:

1236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.9

0.45

0.9

63.6

38.5

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

74.6

0.86

1.6

87.9

37.7

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344

ENSAPLT00000037502

28567823 - 28610166

42344

ENSAPLT00000006014

28568562 - 28610166

41605