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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28595052_28596343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28595052 - 28596343

Intron Length:

1292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TGCATTTTAAGT

Flanking Amino Acid:

ESKEFFAGIKIHPETYDISE

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

76.9

34.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

70.4

0.46

65.3

41.1

Minor 5ss

39.6

-1.2

2.8

50.5

45.7

Minor BPS

54.1

0.21

1.7

68.35

42.9

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037502

28567823 - 28610166

42344

ENSAPLT00000006014

28568562 - 28610166

41605

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344