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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28596434_28598054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28596434 - 28598054

Intron Length:

1621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTGTTCTACA

Flanking Amino Acid:

DGINIRLGDRVYCSSSAFFV

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

66.6

35.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

89.5

0.89

0.7

84.3

30.8

Minor 5ss

46.9

-0.3

2.5

53.6

44.8

Minor BPS

48.8

-0.1

2.2

71.31

40.9

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006013

28567823 - 28610166

42344

ENSAPLT00000046864

28567823 - 28610166

42344

ENSAPLT00000037502

28567823 - 28610166

42344

ENSAPLT00000006014

28568562 - 28610166

41605