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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28604852_28605255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28604852 - 28605255

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

ATTTGTTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.8

29.7

Major BPS

67.6

0.44

1.2

Major PPT

89.5

0.89

0.6

22.6

Minor 5ss

38.1

-1.3

3.6

56.6

Minor BPS

64.5

0.45

1.8

76.23

34.9

Associated Gene:

Gene:

VWDE

Ensembl Gene ID:

ENSAPLG00000005813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046864

28567823 - 28610166

42344

ENSAPLT00000006013

28567823 - 28610166

42344