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Intron Name: Anas_platyrhynchos_platyrhynchos_2_28654690_28658832_F

Intron Information:

Intron Rank:

138865

Intron Class:

major

Intron Phase:

Intron Coordinates:

28654690 - 28658832

Intron Length:

4143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAAAT

5'SS Class:

major

3'SS Sequence:

TTTTCAAGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCCTTTTCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

73.7

36.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.2

0.59

70.4

39.1

Minor 5ss

34.1

-1.8

3.2

49.2

46.6

Minor BPS

49.6

0.05

1.8

66.64

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027669

28652368 - 28663046

10679