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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2898466_2899471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2898466 - 2899471

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

PSGEKWSKGDKLSDPCTSRW

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

72.3

31.7

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

40.9

-1

52.6

38.2

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

NKTR

Ensembl Gene ID:

ENSAPLG00000012358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012886

2892625 - 2922781

30157

ENSAPLT00000031279

2834104 - 2922792

88689

ENSAPLT00000029865

2891469 - 2915792

24324

ENSAPLT00000021598

2892625 - 2918153

25529

ENSAPLT00000040444

2891629 - 2922781

31153

ENSAPLT00000020519

2892625 - 2922781

30157

ENSAPLT00000039666

2890241 - 2915792

25552