Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_29281801_29283312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29281801 - 29283312

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

GCTTTTCTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GCTTTTCTAATA

Flanking Amino Acid:

SYGEKCLYNVSAYDQKPQVG

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

61.3

0.28

30.6

Major PPT

73.6

0.53

0.9

35.3

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

54.5

0.14

1.6

63.76

37.2

Associated Gene:

Gene:

ETV1

Ensembl Gene ID:

ENSAPLG00000007011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007319

29253234 - 29317053

63820

ENSAPLT00000047398

29253234 - 29317053

63820