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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2955581_2955752_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

2955581 - 2955752

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGGAAAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTAAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

72.1

37.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

50.2

1.1

45.8

44.1

Minor 5ss

34.8

-1.7

2.9

45.4

42.6

Minor BPS

59.8

0.38

1.7

78.79

37.6

Associated Gene:

Gene:

SEC22C

Ensembl Gene ID:

ENSAPLG00000012311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012818

2955489 - 2968661

13173