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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2955837_2956142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2955837 - 2956142

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGAAGT

5'SS Class:

major

3'SS Sequence:

GTTTCGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TTAACCTAAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

70.2

39.9

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

0.76

0.9

80.8

36.8

Minor 5ss

37.8

-1.4

3.1

55.6

42.7

Minor BPS

53.7

0.09

67.93

43.4

Associated Gene:

Gene:

SEC22C

Ensembl Gene ID:

ENSAPLG00000012311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012818

2955489 - 2968661

13173