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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2958727_2960817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2958727 - 2960817

Intron Length:

2091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTTGTAGC

5'SS Class:

major

3'SS Sequence:

TATAACGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTATAACG

Flanking Amino Acid:

ASRPYAFLEFDNVIQKVKWH

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

62.7

41.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.4

0.48

66.3

44.4

Minor 5ss

38.7

-1.3

2.4

43.7

37.8

Minor BPS

61.4

0.22

1.7

68.56

38.9

Associated Gene:

Gene:

SEC22C

Ensembl Gene ID:

ENSAPLG00000012311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039020

2953527 - 2969357

15831

ENSAPLT00000018903

2952910 - 2968661

15752

ENSAPLT00000012818

2955489 - 2968661

13173