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Intron Name: Anas_platyrhynchos_platyrhynchos_2_29658848_29692674_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
29658848 - 29692674

Intron Length:
33827

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGTACT

5'SS Class:
strong_major

3'SS Sequence:
ATTCTTCATCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGTATTTTAATT

Flanking Amino Acid:
EFSQLQKYAEYSTKKIKDVL

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
86.5
28.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
74.6
0.55
0.9
67.4
38.8

Minor 5ss
40.8
-1
2.8
57.5
39.6

Minor BPS
70.3
0.71
1.2
80.77
35.1

Associated Gene:

Gene:
DGKB

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29370929 - 29745640
374712

29381146 - 29728554
347409

29370929 - 29717062
346134

29370929 - 29728554
357626

29370929 - 29698675
327747

29370929 - 29728554
357626

29370929 - 29698675
327747