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Intron Name: Anas_platyrhynchos_platyrhynchos_2_29964901_29966247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29964901 - 29966247

Intron Length:

1347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTACAG

Flanking Amino Acid:

NTPSHHRVHHGRNPYCIDKN

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

78.1

36.4

Major BPS

100

1.24

0.5

100

Major PPT

84.3

0.77

0.8

34.5

Minor 5ss

37.7

-1.4

3.6

54.6

44.9

Minor BPS

55.7

0.04

2.1

70.06

42.7

Associated Gene:

Gene:

AGMO

Ensembl Gene ID:

ENSAPLG00000007511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023942

29921054 - 30064404

143351

ENSAPLT00000007788

29943495 - 30064404

120910

ENSAPLT00000037986

29868903 - 30064404

195502

ENSAPLT00000032265

29838412 - 30064404

225993

ENSAPLT00000031292

29950075 - 30064404

114330