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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30097362_30136810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30097362 - 30136810

Intron Length:

39449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

RAGKRKSDSSDSQEGNYKSE

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

70.5

38.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

37.4

-1.4

3.6

56.7

47.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

MEOX2

Ensembl Gene ID:

ENSAPLG00000007517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036082

30084544 - 30152968

68425

ENSAPLT00000007797

30084544 - 30137675

53132