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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30214131_30227135_F

Intron Information:

Intron Rank:

144461

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30214131 - 30227135

Intron Length:

13005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TTGTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CATTCATTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

85.6

0.8

80.6

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

55.9

0.26

1.9

74.1

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047606

30213168 - 30228531

15364