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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30338040_30390267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30338040 - 30390267

Intron Length:

52228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTA

Flanking Amino Acid:

LVYGLLIQCKDHFSLQETVN

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

88.7

25.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

1.1

0.4

13.8

Minor 5ss

43.5

-0.7

2.6

59.2

45.4

Minor BPS

59.9

0.31

1.8

75.92

35.5

Associated Gene:

Gene:

CRPPA

Ensembl Gene ID:

ENSAPLG00000007572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022592

30335729 - 30463383

127655

ENSAPLT00000007861

30337935 - 30463383

125449