Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_30419049_30436515_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30419049 - 30436515

Intron Length:

17467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

FDVIYEAYQQCTDHDLDYGT

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

70.3

39.8

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

CRPPA

Ensembl Gene ID:

ENSAPLG00000007572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022592

30335729 - 30463383

127655

ENSAPLT00000046314

30337951 - 30463383

125433

ENSAPLT00000007861

30337935 - 30463383

125449

ENSAPLT00000038881

30346196 - 30463383

117188

ENSAPLT00000036138

30387787 - 30463383

75597

ENSAPLT00000035255

30388696 - 30463383

74688