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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30548239_30549812_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30548239 - 30549812

Intron Length:
1574

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGGATC

5'SS Class:
major

3'SS Sequence:
CTCTTTTGTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAC

U12 Branch Point Sequence:
TCTGTATTTACG

Flanking Amino Acid:
KRKQEKKQKKDEVQPGESST

Intron Amino Acid Position:
385

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1.1
78.1
36.4

Major BPS
78.8
0.71
0.9
69.7
37.1

Major PPT
78.1
0.63
0.9
72.5
37.7

Minor 5ss
33.2
-1.9
3.1
43.3
44

Minor BPS
46.6
-0.4
2.1
55.74
45.5

Associated Gene:

Gene:
ANKMY2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30536857 - 30570215
33359

30547793 - 30570215
22423