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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_30686447_30686752_F

Intron Information:

Intron Rank:
149905
Intron Class:
major
Intron Phase:
Intron Coordinates:
30686447 - 30686752
Intron Length:
306

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTATGAGAA
5'SS Class:
major
3'SS Sequence:
CATGGTTATACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTTTTTTTCATG
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.6
0.56
1
64
36.2
Major BPS
100
1.24
0.5
100
0
Major PPT
68.7
0.42
1
61.2
43.6
Minor 5ss
35.4
-1.7
3.3
37.9
47
Minor BPS
60.3
0.18
1.8
69.97
38.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030642
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000031394
30686246 - 30686776
531