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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30710604_30712605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30710604 - 30712605

Intron Length:

2002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGGTTCACAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

44.6

-0.5

1.9

50.59

Associated Gene:

Gene:

AGR3

Ensembl Gene ID:

ENSAPLG00000008767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033180

30702571 - 30712720

10150

ENSAPLT00000009109

30702571 - 30712756

10186