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Intron Name: Anas_platyrhynchos_platyrhynchos_2_30915642_30919333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30915642 - 30919333

Intron Length:

3692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAGAT

U12 Branch Point Sequence:

TTGTCTCTGAGG

Flanking Amino Acid:

QILEGELLLQALNGFVLVVT

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

49.4

-0

1.2

46.7

38.9

Major PPT

81.1

0.7

0.8

73.4

37.1

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

47.9

-0.3

58.72

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022927

30876483 - 30935542

59060

ENSAPLT00000009156

30876483 - 30934845

58363