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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31111069_31113580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31111069 - 31113580

Intron Length:

2512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TATGCTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATGAC

U12 Branch Point Sequence:

CTGACTATGACC

Flanking Amino Acid:

VQLHAYISDTGVCNDHGKTY

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

62.4

0.31

1.1

55.1

40.4

Major PPT

66.2

0.37

1.1

61.7

44.1

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

-0.1

1.7

58.98

40.5

Associated Gene:

Gene:

SNX13

Ensembl Gene ID:

ENSAPLG00000009153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018790

31099193 - 31163954

64762

ENSAPLT00000009623

31099193 - 31163954

64762