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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31113651_31117261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31113651 - 31117261

Intron Length:

3611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCCCACCATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCTCCCCCACCA

Flanking Amino Acid:

NGSPTGSINLSLDDLSNVPS

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

65.1

0.34

0.9

57.7

31.8

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

45.7

-0.3

2.1

61.96

43.8

Associated Gene:

Gene:

SNX13

Ensembl Gene ID:

ENSAPLG00000009153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018790

31099193 - 31163954

64762

ENSAPLT00000009623

31099193 - 31163954

64762

ENSAPLT00000045753

31099193 - 31163954

64762