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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31121402_31122972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31121402 - 31122972

Intron Length:

1571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATA

5'SS Class:

strong_major

3'SS Sequence:

GATCTCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GATCTCTTGACA

Flanking Amino Acid:

GVYEQYLSEKASPRVNIDDN

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

80.8

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.9

0.45

64.8

Minor 5ss

35.7

-1.6

3.3

48.3

47.4

Minor BPS

66.3

0.51

1.2

69.47

Associated Gene:

Gene:

SNX13

Ensembl Gene ID:

ENSAPLG00000009153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045753

31099193 - 31163954

64762

ENSAPLT00000018790

31099193 - 31163954

64762

ENSAPLT00000009623

31099193 - 31163954

64762