Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_31190931_31192473_R

Intron Information:

Intron Rank:

144290

Intron Class:

major

Intron Phase:

Intron Coordinates:

31190931 - 31192473

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.2

0.55

69.3

41.1

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

55.4

0.03

1.9

64.82

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038344

31186498 - 31192629

6132