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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31195708_31197094_R

Intron Information:

Intron Rank:

144286

Intron Class:

major

Intron Phase:

Intron Coordinates:

31195708 - 31197094

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

AAAGTTTCATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.7

35.4

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

82.4

0.73

0.9

76.8

37.3

Minor 5ss

47.1

-0.3

2.6

65.5

45.8

Minor BPS

38.3

-0.8

1.8

47.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047502

31192013 - 31197401

5389

ENSAPLT00000032324

31189400 - 31197401

8002